Ilya B. Slizovskiy
Biochemistry, Genetics and Molecular Biology · Purdue University West Lafayette
Publications
24
Citations
240
Est. group size
~5
Recurring co-author estimate
Active years
7
Publishing since 2020
Ilya B. Slizovskiy studies microbial communities (microbiomes) and antimicrobial resistance genes in animals, food production systems, and the environment, using genomic and bioinformatic tools. Much of the work develops and applies sequencing and computational methods to detect resistance genes and mobile genetic elements that can spread them, in settings such as livestock farms, food processing, and wildlife. This research aims to better understand how antimicrobial resistance arises and moves through gut and environmental microbiomes.
Publication output has fluctuated over the last decade with no activity before 2020, followed by an irregular but generally active pace since then, including a notable increase in outputs recorded for 2026.
Generated by claude-sonnet-5 from public bibliographic data · Jul 20, 2026
- Response to: “best practices when benchmarking CATCH for the design of genome enrichment probes”
Bioinformatics · 2026
- An atlas of the maturing nasopharyngeal microbiome in dairy calves from birth to weaning: Protocol for a microbiome-based systematic review and meta-analysis
Open MIND · 2026
- Dataset and Supplementary Materials for: Postpartum Systemic Inflammation is Reflected in Early Distinct Fecal Microbiome Differences in Dairy Cows
Zenodo (CERN European Organization for Nuclear Research) · 2026
- Dataset and Supplementary Materials for: Postpartum Systemic Inflammation is Reflected in Early Distinct Fecal Microbiome Differences in Dairy Cows
Zenodo (CERN European Organization for Nuclear Research) · 2026
- Dataset and Supplementary Materials for: Postpartum Systemic Inflammation is Reflected in Early Distinct Fecal Microbiome Differences in Dairy Cows
Zenodo (CERN European Organization for Nuclear Research) · 2026
- Postpartum Systemic Inflammation is Reflected in Early Distinct Fecal Microbiome Differences in Dairy Cows
bioRxiv (Cold Spring Harbor Laboratory) · 2026
- Reducing skin microbiome exposure impacts through swine farm biosecurity
GigaScience · 2025
- S2047 Fecal Microbiota Transplantation Therapy Alters Resistome Burden and Mobilization Potential in a Disease-Dependent Manner
The American Journal of Gastroenterology · 2025
- Slaughtering processes impact microbial communities and antimicrobial resistance genes of pig carcasses
The Science of The Total Environment · 2024
- The gut microbiome and resistome of yellow perch (Perca flavescens) living in Minnesota lakes under varying anthropogenic pressure
One Health · 2024
- The TELCoMB Protocol for High‐Sensitivity Detection of ARG‐MGE Colocalizations in Complex Microbial Communities
Current Protocols · 2024
- Factors impacting target-enriched long-read sequencing of resistomes and mobilomes
Genome Research · 2024
- Target-enriched long-read sequencing (TELSeq) contextualizes antimicrobial resistance genes in metagenomes
Microbiome · 2022
- Syotti: scalable bait design for DNA enrichment
Bioinformatics · 2022
- AMR-meta: a <i>k</i>-mer and metafeature approach to classify antimicrobial resistance from high-throughput short-read metagenomics data
GigaScience · 2022
- bioRxiv (Cold Spring Harbor Laboratory)×3
- Zenodo (CERN European Organization for Nuclear Research)×3
- Bioinformatics×2
- GigaScience×2
- Frontiers in Genetics×2
- Yong-Seok Kim
Biochemistry, Genetics and Molecular Biology · The Ohio State University
- Yuzhen Ye
Biochemistry, Genetics and Molecular Biology · Indiana University
- K. Gerhardt
Biochemistry, Genetics and Molecular Biology · The Ohio State University
- Kaiyuan Zhu
Biochemistry, Genetics and Molecular Biology · Indiana University
- Bohdan B. Khomtchouk
Biochemistry, Genetics and Molecular Biology · Indiana University
This profile was generated automatically from public scholarly data (OpenAlex). Group size and activity levels are estimates derived from co-authorship patterns.
Last updated Jul 20, 2026.
Claim or correct this profile