LabCompass

Seth Winfree

Biochemistry, Genetics and Molecular Biology · Indiana University

OpenAlex ORCID
Single-cell and spatial transcriptomicsChronic Kidney Disease and DiabetesCell Image Analysis TechniquesAI in cancer detectionKidney Stones and Urolithiasis Treatments

Publications

170

Citations

4,508

Est. group size

~10

Recurring co-author estimate

Active years

25

Publishing since 2002

Research summary
AI-generated

Seth Winfree studies how cells are organized within tissues, especially in the kidney and in disease settings, by developing and applying imaging and computational tools. A major focus is 'tissue cytometry'—analyzing three-dimensional microscope images of tissue to map individual cells—often combined with machine learning to identify and count different cell types. This work spans kidney injury, tuberculosis, and cancer.

Tissue imaging and 3D cytometryMachine learning for cell segmentation and analysisKidney injury and disease biologyImmune cell organization in tissuesSingle-cell and spatial mapping

Publication activity peaked around 2022 and has declined in the most recent years, though counts for 2025-2026 may be incomplete.

Generated by claude-opus-4-8 from public bibliographic data · Jul 11, 2026

Publication cadence
Publications per year over the last 10 years — averaging 14.4/year recently
2017: 17 publications172018: 14 publications182019: 9 publications192020: 17 publications202021: 17 publications212022: 33 publications33222023: 20 publications232024: 11 publications242025: 4 publications252026: 4 publications26
Recent publications
Publishes in
  • Journal of the American Society of Nephrology×24
  • Zenodo (CERN European Organization for Nuclear Research)×19
  • bioRxiv (Cold Spring Harbor Laboratory)×18
  • PMC×8
  • Kidney International×5

This profile was generated automatically from public scholarly data (OpenAlex). Group size and activity levels are estimates derived from co-authorship patterns.

Last updated Jul 11, 2026.

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