Matthew W. Hahn
Biochemistry, Genetics and Molecular Biology · Indiana University
Publications
332
Citations
30,407
Est. group size
~1
Recurring co-author estimate
Active years
42
Publishing since 1985
Matthew W. Hahn studies how genomes evolve across species and populations, focusing on the methods used to reconstruct evolutionary relationships (phylogenetics) and detect processes like gene flow, recombination, and adaptation. His work combines computational and statistical modeling with genetic data, including developing software tools and applying machine learning to build and interpret evolutionary trees. Study systems range from phytoplankton and rockfishes to lemurs and mitochondrial genomes.
Publication activity has been fairly steady but modestly declining, from around 20-30 papers per year in the late 2010s to roughly 14 per year in recent years.
Generated by claude-opus-4-8 from public bibliographic data · Jul 11, 2026
- Ancestry-specific performance of variant effect predictors in clinical variant classification
bioRxiv (Cold Spring Harbor Laboratory) · 2026
- Linking genotype to longevity under genealogical discordance in <i>Sebastes</i> rockfishes
bioRxiv (Cold Spring Harbor Laboratory) · 2026
- IQ-TREE 3: Phylogenomic Inference Software using Complex Evolutionary Models
Molecular Biology and Evolution · 2025
- Genome‐Wide Adaptation to a Complex Environmental Gradient in a Keystone Phytoplankton Species
Molecular Ecology · 2025
- Estimating recombination using only the allele frequency spectrum
Genetics · 2025
- Inconsistency of parsimony under the multispecies coalescent
Theoretical Population Biology · 2025
- Estimating recombination using only the allele frequency spectrum
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- Optische Emissions Spektroskopie (OES) zur Differenzierung von malignem und benignem Brustgewebe
Senologie - Zeitschrift für Mammadiagnostik und -therapie · 2025
- Estimating the rate of quantitative trait evolution in the presence of gene tree discordance by calculating likelihoods across trees
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- No molecular evidence for Muller’s ratchet in mitochondrial genomes
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- Using gene trees with lineage-specific duplicates for phylogenetic inference mitigates the effects of long-branch attraction
bioRxiv (Cold Spring Harbor Laboratory) · 2024
- The Meaning and Measure of Concordance Factors in Phylogenomics
Molecular Biology and Evolution · 2024
- MAST: Phylogenetic Inference with Mixtures Across Sites and Trees
Systematic Biology · 2024
- Applications of machine learning in phylogenetics
Molecular Phylogenetics and Evolution · 2024
- Ecological and anthropogenic effects on the genomic diversity of lemurs in Madagascar
Nature Ecology & Evolution · 2024
- bioRxiv (Cold Spring Harbor Laboratory)×62
- Figshare×16
- Molecular Biology and Evolution×14
- Molecular Ecology×9
- Genetics×8
This profile was generated automatically from public scholarly data (OpenAlex). Group size and activity levels are estimates derived from co-authorship patterns.
Last updated Jul 11, 2026.
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