James A. Glazier
Biochemistry, Genetics and Molecular Biology · Indiana University
Publications
282
Citations
12,911
Est. group size
—
Recurring co-author estimate
Active years
42
Publishing since 1985
James A. Glazier develops computer models that simulate how cells and tissues behave, move, and reshape themselves during development, injury, and disease. His work uses agent-based and Cellular-Potts modeling approaches to build 'virtual tissues' and 'digital twins' that predict biological outcomes, including tissue growth, immune responses, and effects of radiation or chemical exposure. Recent projects also apply machine learning to speed up and standardize these biological simulations.
Publication activity peaked around 2020-2021 and has since settled to a steady output of roughly 8-9 papers per year.
Generated by claude-opus-4-8 from public bibliographic data · Jul 11, 2026
- Modeling epithelial deformation and cell rearrangement in response to external forces during Zebrafish epiboly
npj Systems Biology and Applications · 2026
- From FAIR to CURE : guidelines for computational models of biological systems
PubMed · 2026
- A Simulation of Semi-Infectious Particles and Genome Complementation Reproduces Interferon Response by Respiratory Epithelial Cells <i>in vitro</i> during Influenza A Virus Infection
bioRxiv (Cold Spring Harbor Laboratory) · 2026
- V-Cornea: A computational model of corneal epithelium homeostasis, injury, and recovery
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- Generative diffusion model surrogates for mechanistic agent-based biological models
Machine Learning Science and Technology · 2025
- Modeling Epithelial Morphogenesis and Cell Rearrangement during Zebrafish Epiboly: Tissue Deformation, Cell-Cell Coupling, and the Mechanical Response to Stress
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- Developing an Agent-Based Mathematical Model for Simulating Post-Irradiation Cellular Response: A Crucial Component of a Digital Twin Framework for Personalized Radiation Treatment
arXiv (Cornell University) · 2025
- BPS2025 - From magnetization to morphogenesis, CPM/GGH, agent-based, multi-cellular virtual tissue models of development and disease
Biophysical Journal · 2025
- Generative diffusion model surrogates for mechanistic agent-based biological models
Zenodo (CERN European Organization for Nuclear Research) · 2025
- V-Cornea: A computational model of corneal epithelium homeostasis, injury, and recovery
PLoS Computational Biology · 2025
- Building immune digital twins: An international and transdisciplinary community effort
ImmunoInformatics · 2025
- Surrogate modeling of Cellular-Potts agent-based models as a segmentation task using the U-Net neural network architecture
PLoS Computational Biology · 2025
- EFECT: A Method to Quantify the Reproducibility of Stochastic Simulations
arXiv (Cornell University) · 2024
- A computational dynamic systems model for in silico prediction of neural tube closure defects
Current Research in Toxicology · 2024
- Modeling the roles of cohesotaxis, cell-intercalation, and tissue geometry in collective cell migration of <i>Xenopus</i> mesendoderm
Biology Open · 2024
- bioRxiv (Cold Spring Harbor Laboratory)×19
- arXiv (Cornell University)×10
- PLoS Computational Biology×7
- npj Systems Biology and Applications×4
- PLoS ONE×4
This profile was generated automatically from public scholarly data (OpenAlex). Group size and activity levels are estimates derived from co-authorship patterns.
Last updated Jul 11, 2026.
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