LabCompass

Ellen M. Quardokus

Biochemistry, Genetics and Molecular Biology · Indiana University

OpenAlex ORCID
Established · publishing since 1992
Single-cell and spatial transcriptomicsCell Image Analysis TechniquesBacterial Genetics and BiotechnologyBiomedical Text Mining and OntologiesAI in cancer detection

Publications

85

Citations

4,482

Est. group size

~3

Recurring co-author estimate

Active years

35

Publishing since 1992

Research summary
AI-generated

Ellen M. Quardokus works on organizing and standardizing biological data about human and animal tissues, especially at the level of individual cell types. Much of the recent work involves building reference tools, ontologies (structured vocabularies), and antibody panels that help researchers map and label anatomical structures, cell types, and biomarkers across organs. Earlier work also included tools for detecting and analyzing bacterial cells in microscopy images.

Single-cell and spatial transcriptomicsCell type ontologies and standardsMultiplexed antibody-based tissue imagingAnatomical mapping (ASCT+B tables, tissue atlases)Bacterial cell analysis and image detection

Publication activity began around 2020 and has been variable but generally active, with a notable peak in 2022 and another rise in 2026.

Generated by claude-opus-4-8 from public bibliographic data · Jul 9, 2026

In context
Among 1,724 established Biochemistry, Genetics and Molecular Biology PIs within our index
Citations: 4,482cohort median 3,385
h-index: 27cohort median 27
Publications / year (recent): 9.4cohort median 4.6

Typically publishes in teams of ~7 · 35% small-team papers (≤3 authors) · across 11 venues

Publication cadence
Publications per year over the last 10 years — averaging 9.4/year recently
1718192020: 4 publications202021: 5 publications212022: 18 publications18222023: 9 publications232024: 4 publications242025: 4 publications252026: 12 publications26
Recent publications
Publishes in
  • Zenodo (CERN European Organization for Nuclear Research)×12
  • Open MIND×11
  • bioRxiv (Cold Spring Harbor Laboratory)×9
  • Scientific Data×5
  • Communications Biology×2
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By research-topic overlap
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  • Daniel P. Gramling

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This profile was generated automatically from public scholarly data (OpenAlex). Group size and activity levels are estimates derived from co-authorship patterns.

Last updated Sep 1, 2026.

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