Douglas K. Brubaker
Biochemistry, Genetics and Molecular Biology · Purdue University West Lafayette
Publications
93
Citations
919
Est. group size
~7
Recurring co-author estimate
Active years
14
Publishing since 2013
Douglas K. Brubaker's research uses computational and systems biology approaches, including single-cell data analysis and computational modeling, to study how microbes, immune cells, and metabolites interact in the body. His work spans diverse tissues and conditions, including the gut, vagina, liver, and colorectal cancer, often linking microbiome composition or immune cell behavior to disease outcomes. Much of the work integrates large-scale sequencing data (like single-cell RNA sequencing) with computational modeling to generate hypotheses about disease mechanisms and potential therapeutic targets.
Publication output has grown substantially over the last decade, rising from occasional papers in 2017-2022 to a notably higher and more consistent output from 2023 onward.
Generated by claude-sonnet-5 from public bibliographic data · Jul 20, 2026
- A ligand-centered framework for γδ T cell activation in colorectal cancer revealed by single-cell and transformer-based perturbation
Frontiers in Immunology · 2026
- Systems mapping of intra-donor, cross-tissue T cell clonal expansion and tissue adaptation in the gut-liver-blood axis
Cell Reports · 2026
- Integrated cross-species translation and biophysical multi-scale modeling links molecular signatures and locomotory phenotypes in spaceflight-induced sarcopenia
npj Microgravity · 2026
- Risk of HSV-2 Acquisition Among Women with Bacterial Vaginosis: Systematic Review and Meta-Analysis
Viruses · 2026
- Rumenomics: evaluation of rumen metabolites from healthy sheep identifies differentially produced metabolites across sex, age, and weight
PubMed Central · 2026
- Modeling single nucleus microglia across species identifies immune pathways and therapeutic candidates in Alzheimer’s disease
npj Systems Biology and Applications · 2026
- A framework for predictive modeling of microbiome multi-omics data: latent interacting variable-effects (LIVE) modeling
BMC Bioinformatics · 2025
- Chondrogenic and chondroprotective response of composite collagen I/II-hyaluronic acid scaffolds within an inflammatory osteoarthritic environment
Biomaterials Science · 2025
- Understanding the Associations of Urogenital Microbiomes With Fertility and In Vitro Fertilization
American Journal of Reproductive Immunology · 2025
- Oral Contraceptives Induce Time- and Intestinal Segment-Dependent Shifts in the Gut Microbiota
Nutrients · 2025
- Single-Cell Analysis Reveals Tissue-Specific T Cell Adaptation and Clonal Distribution Across the Human Gut-Liver-Blood Axis
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- Comparative Metabolomic Analysis of Vaginal Microbiota in Planktonic and Biofilm States Unveils Species-Specific Metabolic Signatures
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- Personalized Gut–Liver Microphysiological System Maps Donor-Specific Tissue-Resident Immunity and Reveals a Conserved Metabolic Crosstalk
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- A Ligand-Centered Framework for γδ T Cell Activation in Colorectal Cancer Revealed by Single-Cell and Transformer-Based Perturbation
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- Identifying a Vaginal Microbiome-Derived Selective Antibiotic Metabolite via Microbiome Pharmacology Analysis
bioRxiv (Cold Spring Harbor Laboratory) · 2025
- bioRxiv (Cold Spring Harbor Laboratory)×21
- The Journal of Immunology×3
- Cell Reports×2
- Science Signaling×2
- iScience×2
- Hongyu Gao
Biochemistry, Genetics and Molecular Biology · Indiana University
- Andrew J. C. Russell
Biochemistry, Genetics and Molecular Biology · The Ohio State University
- Andreas Bueckle
Biochemistry, Genetics and Molecular Biology · Indiana University
- Anjun Ma
Biochemistry, Genetics and Molecular Biology · The Ohio State University
- Austin Hartman
Biochemistry, Genetics and Molecular Biology · Purdue University West Lafayette
This profile was generated automatically from public scholarly data (OpenAlex). Group size and activity levels are estimates derived from co-authorship patterns.
Last updated Jul 20, 2026.
Claim or correct this profile